Lab Members:
Professor Sagi Snir
Education
Postdoc: Math & Computer Science, UC Berkeley, 2006
Ph.D.: Computer Science, Technion , Israel, 2004
Contacts:
Phone: (972) 4-8288774, Fax: 4-8288763
Email: ssagi@research.haifa.ac.il
Principal Research Interests:
Phylogenetics, Quartet Methods, Universal Pacemaker (UPM) of genome evolution, Lateral Gene Transfer, Comparative Genomics, Convex Recoloring, Hadamard Conugation, Graph Theory, Combinatorial Optimization, Approximation Algorithm
Udi Mahanaymi – Lab Manager
Education:
B.Sc. Math & Computer Science, Hebrew University of Jerusalem, 1986
Contacts:
Phone: (972) 52-8933515
Email: udimaha@yahoo.com
Recent Close Collaborators
Professor of Mathematics and Statistics
Director for Biomathematics Research Centre
Department of Mathematics and Statistics
University of Canterbury
Christchurch, NEW ZEALAND
Professor, biophysicist
Professor
Computer Science
Human Genetics
University of California, Los Angeles
National Center for Biotechnology
Information (NCBI)
National Library of Medicine (NLM)
National Institutes of Health (NIH)
Department of Mathematics
University of Haifa, Israel
Former Lab Members
Name
Tzahi Yona
Gilad Levi
Dr. Vladimir Frenkel
Gon Carmi
Ben Yohai
Position
MSc Student
MSc Student
Staff Researcher
MSc Student
MSc Student
MSc Student
Subject
MaxCut
Genome Mapping
Combinatorics, Genetics
Genome Mapping
Prokaryotic Evolvability
Superfamily Evolution
Orit Adato
Dr Assaf Malik
Dr Reuven Cohen
Anton Shifman
Cyril Nikolaev
Ofer freedman
Nitsan Daniel
Oren Srulevich
Noga Ninio
Yifat Felder
MSc Student
Post-Doc
Post-Doc
MSc Student
Undergrad Student
Undergrad Student
Undergrad Student
Undergrad Student
MSc Student
MSc Student (joint with Benny Chor)
Detecting Horizontal Gene Transfer
Spalax Evolution
Quartet Based Supertree
Whole Genome Phylogeny
Synteny based Phylogeny
Synteny based Phylogeny
Rooted Supertree Construction
Rooted Supertree Construction
Synteny Index: A Tool for Detecting Horizontal Gene Transfer Between Closely Related Species and Constructing Phylogenetic Trees
Using novel enrichment techniques to analyze protein superfamilies abundances